Annotate on chromosomes/chromosomal regions
and visualize feature-associated data.
version
release notes
build with
developed by
cite chromoMap publication at
Lakshay Anand , Carlos M. Rodriguez Lopez
Environmental Epigenetics & Genetics Group, University of Kentucky, USA
Some text in the Modal..
Visualize genes, genomes, or genomic regions of any living organism.
Polyploidy
Polyploidy allows visualization of different sets of chromosomes, differing in size and numbers, on the same plot. learn more
Chromosome Heat Maps
Visualize feature-associated data, like various multi-omics data, as heat colors on chromosomes. learn more
Bar and Scatter Plots
Visualize feature-associated data, for the annotated features, as either bar plots or scatter plots. learn more
epi-tags
Mark genomic loci with condition-based tags. learn more
Filters
Allows conditional-coloring of bar/scatter plots based on mathematical conditions on the data. learn more
chromLinks
visualize connections or links between loci. learn more
Discrete Color Maps
Visualize grouped annotations as discrete colors on the chromosomes. learn more
Labellings
Add labels to the chromosome plots. learn more
Hyperlinks
Add hyperlinks for annotated features. learn more
Highly Customizable
Tweak every aspect of the plot.
export options
export the plots as either standalone HTML documents or static images.
