Release Notes

version 0.4.1 (March 2022)

• New 2D-Chromosome Plots to visualize annotations in 2d-space.
• support for high-resolution maps(increasing number of windows or setting arbitrary window size).
• adding labels to the legends.
• adding labels on y-axis for scatter/bar/2d plots.
• display or remove chromosomes using display.chr argument
• disable interactivity using interactivity.
• Adding guides to view genomic window positions. set guides color.
• Chromosome scale suffix and control its 'ticks'.
• built-in export to PNG/SVG buttons.
• manually change order for categories in dicrete color-map plots.

version 0.3.1 (April 2021)

• visualize links or connections between loci using chromLinks Plots.
• input as R objects are now supported
• support for multi-factor scatter plot
• add texts/labels on to the vertical grid-lines. the lines positions are now passed as genomic positions in bp.
• colors are now automatically assigned if not manually passed.
• support for using R color names like ‘red3’
• quick zoom-in option using region.

version 0.3 (Jan 2021)

• new feature added:
• visualizing the feature-associated data as bar or scatter plots.
• tag specific loci based on conditions using epi-tags.
• conditional coloring in bar/scatter plots
• new aggregate functions: max, min, and count
• more control on labels (label angle an label font-size)
• highlighting using vertical grid-lines
• modify chromosome curves using chr_curve argument

version 0.2 (April 2019)

• supports all organisms and takes BED-like files as input
• new features added like polyploidy, segment-annotation, labels, hyperlinks
• visualizing the feature-associated data as heatmaps or discrete color maps

version 0.1 (May 2018)

• support for only human chromosomes